The structure of the mitoribosome from Neurospora crassa in the P/E tRNA bound state

2024-11-06 REL PDBe PDBe PDBe 2020-04-29 2020-11-11 2020-11-11 2024-11-06 Swedish Research Council NT_2015-04107 Sweden European Research Council (ERC) (ERC-2018-StG-805230 European Union Knut and Alice Wallenberg Foundation 2018.0080 Sweden European Molecular Biology Organization (EMBO) H2020-MSCA-IF-2017 European Union The structure of the mitoribosome from Neurospora crassa in the P/E tRNA bound state Amunts A Itoh Y Neurospora crassa, translating Mitoribosomes, tRNA, mRNA, mL108, TRANSLATION Itoh Y Naschberger A Mortezaei N Herrmann JM Amunts A Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi. Nat Commun UK 11 5187 5187 2020 33056988 doi:10.1038/s41467-020-18830-w 2041-1723 6ywe FULLOVERLAP Mitoribosome of Neurospora crassa in the P/E state Mitoribosome of Neurospora crassa in the P/E state 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 Neurospora crassa K5-15-23-1 23S rRNA Neurospora crassa 1.114857375 1 AAAUGUAAUGGAUAUAAAGCUUAUGUUUAUAUAUAUAGACAUAUAUAAGUAUAUAAAGAGACUACUACCAAUAGCUACAC UAUGUAUUAAGGAGAGUAUAACUUAAUUUAUGUUUAUGAUUUUAUCAUACCCCUAAAAAUGACACCGAGGAGCAAGGGUC GGGUUAGCAUCCUGGUUCGUACACCUUGGUGACCUAGGCUAGUACCAGGUCCCCCUCUAAGGGACUUGUCCCCCUCUAAG GGACUUGCGUCGGUCCUAUCCUAGGCCGAAUAGGUGAAUAAAUACUUACGGACGGCCUUGGUCUGUCCUAGAGGUUAUCA ACAUAUGAACUCUUAGAGAAAUUACUUAAUAAACGAAGUGAAUUGAAAUAUCUUAUUAACUUCAGGAAAAGAAAUCAAAC GAGAUUCUAUGAUUAGUGUGAACGAAAAUAGAGCAGCCUAUUAAAAUAAGUAAAAUGGCUUUAAAGCUGUUUGAAUAUUG UGGGGAACCUUCCUCAAAGGCUAAAUAUAAUACAUGAGUUACAGAGAAAAGUACCGUGAGGGAAAGCUUUGAAAUAGUAG UUUUAUAAGCAGCUCAAGCAAUAAGAAAGCGAGAGCGUACCUUUUGCAUAAUGGGUCACCAAGUUAAUUUUAGAUGCGAG CGAAUUUAUUUAUGUUUUUACUGAUUAAACAAUAUAAUGAAUCAUAAUUAUUUUUGUAACGAGUAUUAGUAUUAAAUCUU AAUUUAAUAUUAGUAUAAGUUUUCAGUAUGGCGGCUACAUAGCAUAAUCUAUGCAGCCAGCCAAUAAUUGGAUUUCCAAU CCAAUUUCGGUAAUAAAUAGAUGUGCAUAGUUAAACCGAUCAUUAAAAUAAUGAAUAGUGUCUAAAGUUAGACCCGAAGC CUGGUGAUCUUACUAUAGUCAGGACUAUAAAGGUCCGAACGGGUUAUCGUUGCAAAGAUAUCCGAAGAACUAUGGUAAGC GAGUGAAAGACAACACUGACUAGGAUAGCUGGUUUUCUGCGAAACCUAUAAUAGUAGGCAAUUUAAGUAACAUCUUAGUA GGUACAGAACUUAAUCUCAGACAAGAUGUAGAUUUUCAUACCUAUGUUUAGGUAUGAAAUGCAUUUUUUUUUGUAUACAU CGGGGGAUCGUGAAGAUUUUAUCGGUGAGUAUGUAGACUCGGAAUGACAAAGAUGAAUCUUGAAUAAUCAGACAUAGAAU GAUAAGGUUGUAUGUCAAAAGGGAAACAGCCCAGAACAAGAGUUAAGGUUCCAAAAUUAUUAUUAAGUGAAAUAAAGAAA GUUUUUAUAUAAGUCGACAAGAAGAUGGGCUUGGAAGCAGCCAUAAUUUAAAGAUCUCGUAACAGAGCACUUGUUAAAUC UUAAAAGCAUCGAAAAUUUAACGGAUCUAAAUAAUAUACCGAAACCUUGUCCAUAUGUAACAUUAGUAAUAAUAUGCUAU UAAUGUUAUUUGAUGGGGUAGCAGAACGUUGAGUGAAUCUUAGAUUUUUUUUUUAUAACUAAAUAUAGAUGAUAACUCAA GUGAGAAUGGUGACAUGAGUAACAAAAAAGAGUUUAAGGUACCUAAAAGGUAUCUUAGAGUCUCGCCUAAAGCUUAUGGC UACGUCAAGUAACGGCCUCUAAGUUUAUAAUCUGAAGAUUAUGACGAUGAGAAAAUAACGCGCAGAAGUGCGCUGCUUUG AUACUUAUGGUACCAACAUUUAAAAGUGAAAAUUGUGCAGGAAGGAUCAGUAUCCUUUCAUUCUUAUGUGGGGGAGUGGA CAAAACUGAACAGAGUGUAUCUGAACACAGAUGAGUCCACACCCCCCCCCAUGUAAUGAAUGAAUGACAAACCGUACCUA GAAUCUGAAACAAGUAAGCUAGUAGAGAAUACGAAGGCGUGAAUGAGAUAACAAUCAUAAAGGAACUCGGCAAACUAACU ACCGUAACUUAGGGAUAAGGAGAGCUCAUUAGUCUCGAUUAAUACGAGUAAAAAGGAAGAAGCAUGGAAUAUUGUUGUAC GACUGUUUAAUUAAAACAAAGCACUUUGCAAAAAGACGAUAAGUCUAAGUAUUGAGUGUGAUUUCUGCCCGAUGCCGGCU GGUUAACGAAUUUUCUAAAUUGAAAAAAAAUUUGGUUUCAGAGGAACCCCCGGUUAAUGGCGGCCUUAGCGUGAGGGUCC UAAGGUAGCGAAAUGCCUUGGCCGUUAAAUGCGGUCUUGCAUGAAUGAUGUAACGAUACAACAGCUGUCUCUAUGAUUGA CUCAGUGAAAUUGGAAUAACUGUGCAGAUACAGUUUACCUCUAGUUAGACGAGAAGACCCUAUGCAGCUUUACUGUUACU AAUUAUUGAAUACGAUUCUGAAAAUUUCCAGUGUAAAAGGUAAUCGAUAAGAUAUAAUUGAAACACCUUUAUUUUUCUAU CGUAUUAUUAAACCUUAAAUUAAGGAACAAUUGUUAGAAGACAGUUUAUGCGGGGCACAGGCCCCAUAAAGAGUAAAUGG GUGUGUCUAAAAUUUAUAAAUUUAUGUUUGCAAUUUUUUAUAGUGAUUAUAUAUCAAAUCAUCUUUAUGCUAUUCAUAGA GUGUAUUUAUUAUAUUCCUUGGGUACAGUAUAAAAAUUAUAUAUGUAUUAAUUUACAUAUAUUUUUUCUAAGAAAUUAGG UAAGAUUUUGUUUAUAGAGAAAUUAGAUGUAAAAAAAAAAUCUUAUGAGGGCGGUAUUUAAUAAUCCGCUUCUAAUAUUU UUUUGUAGUUAUUAUUAUAAAUUUAAUAAUAAUCAUGUUUAUUACUUAAAAAGCUUAAUGGCUUAAUCUUGCCUUACUGU UUGAUUAACAACAAAUCUUACAGUCGCGUAAGCGGGGCAUAGGAUCACAAGAUACAAAAAGGAAAGAUCUUGGAUUUUUG GAAAAGCUACGCUAGGGAUAACAGGCUAAUUUGCGCAAGAGUGUACAAAAUGAGUGCGCGGUUUGGCACCUCGAUGUCGG CUUGACUAAUCCUCAUGGAUGCAGAAACUAUGUAGGGUACGACUGUUCGUCGAUUAAAAAGUUACAUGAGCUGGGUUAAA UACGUCGUGAGACAGUAUGGUUUCUAUCUUCUAGAGGGAAUUAGAAUAUAAUAAGGAUUAACCUUUGUACGAAAGGAACA UGGGGUACUAUUGUUAUACCUAGUUGUAUAACAGUUUUAUUAACCUCUGGUUUACCUGUUGUUUAUGUGCCUUAUAUUAA UUUCAUGUGUGAUGCUCCGCAAGGAUAUUACAGGGAUGUUACCGUCACUUGAGUAAAUACAAUAGCAUAAGCAUGGCAGG AAAGCUAAGUUAGUCAAAAAUAAGUGCUGAAAGCAUAUAGGCACGAAAUUUACCUUAAGAUAUUUCUUAAAUAUACGUAA GAAAAUAUUACGUUAAUAGGCUUAGUUUGUAAUAAUCUAGAGAUUUUAAGGAACUAAGUACUAAUUUUAUAAAAAACUGA AUGAUUAAUAUAUCUUACAUUUUC 60S ribosomal protein L1, mitochondrial Neurospora crassa 0.03332766399999999 1 LEVO MASTQQCLASLARLSLSTPTRAALPTIPKFLVPSVAASQVRYATNNPNKGGAKKAPKKKKQYKFFKSWDLTGQQQFSLCD AMRYLRAVEVGQPPLSVKYEVHVKLRTKKNGPVVRDRVRLPTPVKTDTRIAVICPEGSALQEEAKNLGAVMAGEETLFEA IRSGNFPFNKLLCHTESEGALRKANVGKLLGPKGLMPSGKTKTITNNLEATFRDMIGMDEYRERNGVVRMAVGQLGFTPK QLAENIRVFMAKIKSDIGKLDDTTPKMVEEVVLSTTHGPGMSLNAEFAPTDDKIKPEDLESVM Q870V5 60S ribosomal protein L2, mitochondrial Neurospora crassa 0.042260766 1 LEVO MLQPQFRPLLAGTASFAQTVLGRTVARCYATKAATQSASSTSTSNTSKDAKAKIVTPYVRDAGMMRTYKPHTPGIRHLKR PINDHLWKGRPYLPLTFPKKGQSKGGRNHSGRVTVRHRGGGHKRRIRMVDFERWIPGPHTVLRIEYDPGRSAHIALVKEE ATGRKSYIVAADGMRAGDVVQSYRSGLPQDLLDSMGGVVDPGILAARTCWRGNCLPVSMIPVGTQIYCVGSRPDGKAVFC RSAGTYATIISKEEETREDGTKVMTGKFVNVRLQSGEIRRVSKDACATVGIASNIMHHYRQLGKAGRSRWLNIRPTVRGL AMNANDHPHGGGRGKSKGNRHPVSPWGTPAKGGYKTRRKSNVNKWVVTPRVRNMGVRRNKKTT A0A0B0DJN7 Related to ribosomal protein L3, mitochondrial Neurospora crassa 0.041262527 1 LEVO MAPRLPARCWRQLSLVERSATHTTTTAAASSLLLAGRTTPTFSASSPSTVFPSLLPQITKRGVKYGWSTLPKRSRPTRFN QVTQGLPAPTSGPAAALKRREKTTPLRTGVLAVKKGMTVFMGRTGARIPCTVLQLDRVQVVANKTRAKNGYWAVQVGLGE RRAENVGAPQLGYYEAKGIPPKQTLAEFKVRNQDGLLPVGVQLFPDWFHVGQVVDVRGITRGMGFAGGMKRHGFAGQEAS HGNSLNHRTIGSVGGSQGSGSRVLPGKKMPGRMGAQQHTVQNLPILMVDNELGIVVVKGAVAGHKGAVVKVQDAVKKAPP PEEFVEATKQLLNERFPDAEEKLQAARKLHLELKEARRQGLIDSLIKNGLTEKADGNAAVEASA Q873B3 60S ribosomal protein L4, variant Neurospora crassa 0.036402785 1 LEVO MAGKGLKSLNEAMNALSIASKSCRALPMRQSSILPCRRSMASVATPPAANITRSVSEPWQPITNVPVTVYSFPELEPRSL ESYSARHLHLPLRRDILHLAVIYEGDSTRRGMASTKTRYEVHGSHKKMSPQKGTGNARRGTRQSPLMKGGGKTFGPKPRD FSTKLNKKVYDLAWRTALSYRYKRGELIVTEDGLDLPLPNDFLWLAGGGKLSRELEDGYVRKWVHEFMTSLNWGKEAGRT TFITGDKRPNLFTGFELAGAEGRALELWDVDVKDLLETGRIVIERSALKEMIEDHQSDLVTRVAVQGLRQKGPNLGEVLV RAPRY V5IMN1 Related to ribosomal protein L5, mitochondrial Neurospora crassa 0.039170875 1 LEVO MASLRGVSRSARALQPFSAQFAVRRCASTQTGAGAAAATPKSNIPDLAELETRSALDAPIPSEEDKKEFRPWKRAADRKA RLPSSRYQYHPPKYNRGPLHPIQSPPSSDPIARDFVPGPFNMPRLKETFRTVMASDLMTLAYIHTPPGTPKKEPTERLRA WEGDSPYFANRARRAPRGAPELPIRERDISFRNIPEIKEITVSTFVPLGLKNPDLLIVARAVLLAMTGTMPEMTRSKNNV VQWQLQANKPAGCKTTIYGNAAWEFMDRLIHLVLPRIKDWKGVPASTGDGSGNVQFGLNPEDVQLFPEVECNYDMYPAKM IPGCHIAIKTTATSDRQAKLLLQSLGVPFYSN Q96U12 uL6m Neurospora crassa 0.028629158 1 LEVO MFAPSRRRVLEAVASSSSSPVVTLPGFLVPAFQQTAGAAARRNFSATTTRPSKLGRTPLSIPPGVEITIGEPFVKRDMTQ WKQQPKRKITVQGPLGQLEMDIPDFIKIDHDAEARRATLSVANRDEKEQREMWGTTWAYLNRFIMGVSEGHTAVLRLVGI GYRATIDTRPEKEEYPGQQFVCLKLGFSHPVEMGVPKGMKASTPQPTRILLEGINREQVMTFAADIRRWRVPEPYKGKGI FVNGETIKLKQKKIK A0A0B0DQR9 RIBOSOMAL_L9 domain-containing protein Neurospora crassa 0.033173176 1 LEVO MTASALSKWPTCLACLRRLAQPFGTSAARHGEPRARAVPVIRPIVHTQTRAASHRMRLQDQGVVVRLLEDIPKFGRKHAI FRIERGRMRNEWFPKNKAEYMTPARFQELGLTRDAIGEVDRSFVIMSALEAATRPKPEEQKTEEPVPEVQISQVNVPDVT PETAHALLSELIPNTLTFHREPVPIPISQPKPALEPKISPLIARHVPASTPETPSTGEARRAIFGSVSSSDILNQIKALV SGHEEASRIVLGPSSVKIVGLAEDNDRIRHLGRWEIEIAVARAGGLDPVRKSVEILPSAQ A0A0B0DK80 Related to ribosomal protein YmL11, mitochondrial Neurospora crassa 0.037363766 1 LEVO MSLRLSRPAVRGLGSAIKSSRISSRSAALLVPSTSTSAFSTASPQRAAAAGHLRLPDDYVPPTQPPSARPVDTRKSQLLR TYTSMLRSTPLMLIFQHNNLTAIEWAAIRRELSLALSNVPVPEGAPDITSKIHLQVVRTRIFDVALKTVEFFDPSTVEPT TATTATGTKVPATYNHDLSKHAWKAVKEATKNTEAVEKTVYGQLAPLLVGPVAILTLPSVSPAHLGAALSVLAPSPPAFP APSRKKNPGYYDLTCQSGLQKLLLVGGRIEGKAFDYDGIKWVGGIENGIEGLRAQLVHMLQSAGMGLTSVLEGAGKSLWL TMESRRSVLEEEQNPKKEGEGEEEKKE Q6M9C4 uL11m Neurospora crassa 0.016629375 1 LEVO MSKAAKGGAGGVEQVVKLIVGAGQASPSPPVGPALGSKGIKSMDFCKEFNARTAHINTGTPMPVRVTVRPDRSFHFDVRT PHTSWLLLNAAEAPIGKGGKRKGASNPGKEVVGTVSLKHVYEIAKIKQSELRLSGLPLEGLCRAVIYQARSIGINVIP A0A0B0DNH1 uL13m Neurospora crassa 0.020334576 1 LEVO MSQTVGATRLAYSRVWHHISAVTPHPTLSTIKAPSEAITPPSLGRLASRIATILMGKHKPIWDPSTDCGDYVVVTNCAGL YTTGHKKWRKTYYRHNTRPGSLQAITMDALMEKHGGAEVLRKAVSGMLPKNRLRDKRLARLKAFEGDAHPYKENLVRFGG KVVGAPGWEEAVKAIREADMERL A0A0B0E388 Ribosomal protein L14 Neurospora crassa 0.014135629999999998 1 LEVO MIQLKTMLNCIDNSGAALVECAMVVGQKRHASIGDRIVVVVQKQRGADSAGMAASSAATKVKRGDIRHAVVVRTKQKVQR RDGSVVRFDDNACVLINKAGDPIGSRINGVVGQELRKKKWSKILSMAPMQA A0A0B0E7L9 Ribosomal protein L15 Neurospora crassa 0.033951125 1 LEVO MPPRLPLAQAARCCQASLTARPSVPASSPTSSLISLFAALSVQTRSASILASLSDNRGAYHKRIRKGRGPSSGYGKTAGR GTKGQKAHGHVKPWFQGGQTPLIVSHGRKGFVNQFAADMSELNLEKLQEWIEAGRIDPTKPITPKEIIKSGIIGSSIKDG IKLLGRGKESFKIPVTITVSRASASAIEAIEAAGGKIVTRFYTKESLKRLVEGKSLHTDKPLPVGKEHVEEILAQARSLK KKYYRLPDPTSRWDIEYYRDPAHRGYLSHQLAPGESPSLYFKVPTGGEKVKVVRADKVKASKTGDVASEKLF A0A0B0DM93 Related to ribosomal protein L16, mitochondrial Neurospora crassa 0.027443828 1 LEVO MKHNASSALLSAFQGLRISSSATPFRAASLATSAVRRPIAPTPVSVASHVRLFSATAIQAGSWLEPNLNRKKKMMKGRPR VPTGGSTKGTTVVWGDYGLRMRDHHRRISAQQLKLAEDTIKQRLRGQKYRLYKRVACNVGVYVSGNEMRMGKGKGSFDHW ATRVAVNQIIFEIRGQLHEQVIRDAFRLAGHKLPGLYEFVKKGDPPVVGITKLEDGLTVEDLKNPRKKLLMPEITQSAAS TSSTAAPPS Q8X081 uL17m Neurospora crassa 0.022181544999999997 1 LEVO MAGAHVKYRHLSRSSAHRQALLRNLVTSLIKNETIHTTYPKAKEAQRLAEKLITLSKRDTETARRSAQGILYTPDQLLPK LFGEIRERYANRPGGYTRVLRTEPKDQYSQAPSAILELVDGPKDMRFAMTAATVARDREQKTESTDLTKKNMDKVTRFRK DGMRAFEDMVASLRDMKFTAGAINPKEWKKLDR A0A0B0ECK1 bL19m Neurospora crassa 0.028235305 1 LEVO MNVTASLSRRPLGCLKAGLCQSLIRGYATAVAASTTQSTGALPDHNFFRIADKHTKKTRTAFAVFTPPKSPTTLPPSSVV TKSKAFKIANSKLPPLMTKPPSDPMPLLTQQQIARMDPTGARTALFSKARHAARVGDVLMVTHRRGGEPFAGVCLAIRRS GIDTAILLRNHLGKVGVEMWYKIYNKNVAGIEIIKRRAKRARRAKLMYMRQPKHDMGSVEQYVFAWKKMRKVLSSKGLTG GVGGGGGKQKGQESKKKN A0A0B0DXI2 Related to ribosomal protein YmL49, mitochondrial Neurospora crassa 0.023953026999999998 1 LEVO MSRALLRSVLELRTPVTRLPPSFLLPFRPAARFLHQTAQQVEPTSQSDAAAAAATLLKASPPKVTTATTPEAPAAVPTST PFSQQPPISQQVKELLPVLAAQPGHYTTIHIHGKPYLVTEGDTVKLPFKMPGVAPGDVLRLNRASVIGSRDLTLQGAPYV DERLFECRAIVMGTESEPMRVMIKKKRRCRKKKHVFSKHKYTVLRINQLKINDVSSL Q6MVF2 Mitochondrial large ribosomal subunit Neurospora crassa 0.041565995999999994 1 LEVO MSLNVPSRRLLKSAPSSANALVPALQSLSINTRSIHTTPSQQWSLFGWGKQKVEERNKVKEELKQSELARTRKPTQEEIF ERVRGRLEGDSIFADTTPSSQLAAEQDKHKDWATASAEKKLAAAHAKDQTPTGISLKKDHLVRVVDPDPRSRVRWERKMV IRKLQRGTDPWSVEPKAERIARTERKLVYKTGYLPTSVKKLVHLSRQIRGKTVSEALVQMQFSKKKMAKEVKTELLRAEA KAIVTRGMGLGKAAAAAAQKETGAEPVKIQTKDGKHLEIRDPTRIYVAETFVNKGFTRGVELDYRARGRVFKMNKPTTTM TVVLKEEKTRIREHQERVAKKLRQGPWVHLPDRPVTSQRQFYSW Q7S5N0 uL23m Neurospora crassa 0.026005465 1 LEVO MASVAKTGAEALRNAPFRVGKKQIFLPNHVITFVRPLPKQPPNLATFIVPLEFNKLDLRDYLYHVYNVEVTGVRSFVNQR MHEQRHGDVGNWRRPKSQKMMIAELAKPFVWPKPPAEDAREAFDYAMWKKQKTAQEQDTKFQGIRAQGEVVPPSQFEVTK DRKAIKARQSKFLSGEETWAPGKVNAFLNSKIVPEEEGWSEVEENLPLDESAESAAEESSSKGSETRQ A0A0B0DT83 KOW domain-containing protein Neurospora crassa 0.045460116999999994 1 LEVO MDKLLRRVRMAEGMVARRAQRKNALLKRITERKQNKKNGEAFTEAIQQRKAAVEARNEDWMLGPLAPRRELDEITLSNGN FFGSLSPTRALLESEVSEEERKARVAWCGSPKFLCIAPGDRVVVIEGHHKDLIGTIEKLNTRNMTVEIQSEKLKTNTTVP QFMQNDADKPVTQIYARLPISSVRLVHPLKDPQTGEYRDVIIRELRPRNIVHDRPTRTRSMRRFVPGENIIIPWPKQEPI KREDQPADTLRIDVDEKTFVPTLFRPPAPQQVLDELRNKYSIFRTRHTPEYIAKKEQEEQEKEAKKSAAKAMLTPVQEYN RKQRELRRARGQPALTEEMLAKIGEVVARNKLGHHQAPKVKEETVAQIEKAVEQLSLGGGQEDAATTTSPEQPKVV A0A0B0DQ90 Related to 60s ribosomal protein L2 (Mitochondrial) Neurospora crassa 0.049549198999999995 1 LEVO MHLAQLRQPLTRAAANSCHSVCRLPTTHSSVSATAILSEQFAHLRIGPSSSNVAVEGRRYASVKAQGAYRLKPKRTIPKK LGAKKTGDQYVIPGNIIYKQRGTLWHPGENTIMGRDHTIHAAVAGYVKYYRDPQLHPDRQYIGVVFNRNDKLPYPKDAPR KRKLGLVAVPRKVEEVEKPTMSASGLPLFVTRHETIEIPPPAVTTPAAAGKAVKGQGARVSASGAAAVPASSSTISASAS SNSNNGGSSVIAELIKEKLAARAEYNARQSALRKLQQQKMLARRGTRVLRLMNNYSYRETNWEIGRLIGDPGSVPGTEKV GSRKAKFRARRRRRNTFLLGIKERKLAKADRREEYRRRVREKREQRLVQRKEFLAKQREAKKAREGGAAAEKSEKKEVKA EKPAAAAPKVEKPKAPEAAKKESKPKVEEKKAAAAEPKKDSKTEKKD Q8X0Q2 bL28m Neurospora crassa 0.031501131 1 LEVO MSSFLVRPFCLRATTTTTTTTTTTALVQQQLRALTTTTALTYHQPRVPSSAIPIPNVSGRVPLPDSTPVPEDFKIEIPSY PYGPRRVYHQSNTGLYGSALIRFGNNVSKRNEIKTRRKWRPNVQQKRLWSKSLGVFVRTRVTTRVLRTIDKVGGLDEYLL GHKAARVKELGPWGWMLRWRIMQTPEIRERFAKEREALGLPPRREEDEEKSLEEQLREFQVAGIQFAEGKAPKTKGQLKE EADRLIKKSETEEFGLGQEEDLFMKEEPKPTKMA A0A0B0DNQ5 54S ribosomal protein L4, mitochondrial Neurospora crassa 0.029645259999999996 1 LEVO MASPAALRPSMGAIMQTCRSAATAPKVAVAVPVRALSTSAALLKRHKYPTARVTRDNSKQRGESALRKSGTRWKLSVSDE PLPEPVPREELPPIQVDENHGLWDFFYDRETVAMAPLEHTKHGRAWTVSELRKKSWDDLHRLWWVCVKERNRIATANWER TKSELGFGLAEANERDRNVKQTMRGIKHVLTERFYAWEDAVKLAEQDPEIDLSNPENPYTPSTFLEAEETAEGAEASETQ STTTEIDPTTIPSSKSQAEAPRV A0A0B0DW15 Related to ribosomal protein L30 Neurospora crassa 0.018196392999999998 1 LEVO MSFFRITLHRSAIGLPKRTHGVLAALGLRRRNQTVFHPVEPQFAGMLMKVKELVRVEEVPHRLTKRELKDERKPDAGFVV EKQVRRFIPGVGVQDEVDFSKVVEELKAQKVENVEGVEKMVVEGGAVVRDGKRAGDLGVRTRSDWEVIGKMKSVLPKVKA L Q8X098 Related to ribosomal protein YmL36, mitochondrial Neurospora crassa 0.023766728999999997 1 LEVO MSSKLPTTLLRRPSALPSTTTYTAYSASRPTPPSCTAHGAQGQQIRNATFVPRHRRPYQFTQLVQLSDGSTFTVRTTMPT ALYKSAKDSRNHLLWQPSDKSLKNVELDEAGKLAAFRERYGRGWDLDAKMTPEEEAAAAAALAAGGGAGVPGGKAAKKAA EEALLAKKKKEEEEAAKKAAEAEEADPFDSLTDLISGYATENMNPGLNFKETRHYGKKK Q9C2E5 Related to ribosomal protein YmL32 (Mitochondrial),Mitochondrial ribosomal protein subunit L32 Neurospora crassa 0.014114779 1 LEVO MAAMTAAAAAPAMRLFNPSTFFQTLRTQRFGVPALNFAVPAAAISLLPSIPSLLEDIWEGILRAVPKKKTSHMKKRHRQM AGKALKDVTHLNRCPACGNLKRMHHLCSTCLGKLKGFMDRNGGSNAKAY Q9HFL0 Q1K4P1 bL33m Neurospora crassa 0.007027573999999999 1 LEVO MAKKAKSRIINVRLISMAMTGYFYTFTRPRTSLPMSMLKYDPIVRRKVLFLEQKRKGRS A0A0B0E6P7 Related to ribosomal protein L34, mitochondrial Neurospora crassa 0.014853288 1 LEVO MSRIFSSALQAVFKPSAFLPKTATRSFSILPSLRPATLSSTPSTIFRAPNAITAPSASPSATTGIDGEVLDLLSASSLIS SHPALSGLGSQIRCGPRPTMSGATRLVQKRRHGFLSRVKTKNGQKTLKRRLAKGRLRLSA Q96U95 Ribosomal protein Neurospora crassa 0.013960405 1 LEVO MSNLFRSLASSMRALSLAAPRATAVNTTKTVVSTHQTRCLSQGLLSRHICTPMCSHNRPVAVCQSAKNGLQSKQQSRGMK VHSAIKKRCEHCKVVRRKANKRQNGYLYIICPANPRHKQRQGYR Q7S4E7 PEBP-like protein Neurospora crassa 0.050749188 1 LEVO MSTCQQVARPLVRCLRQTGPGAATCSTRSVAVAAVRPFSSTPMRKEEGATTTTTTSPVDSTTTPPPLPSATEAKATVADT VVGGPELGSRRRRAALATTGNLPFEQLPYQCFQDARKILQQDRAAKIAQIVKETEKIKLIEARDASEFEGGEAAKQTRIK SLRKYIEELKILADINDPEVKRRFEDGRGDMTKPVYRFMAERRWRSMDYKIIAQRISQFHVVPDLLPAFDPTMDVKLSFR GYQVSPGAILDSRVTEVAPTLRMQVFDKGERLLTVVVIDSDVPDVTHDNFKRRCHFLAANIPWDPSKTVLSLRSVGDRVE GDVGKPWLPPFAQKGSPYHRLNVFVLEQKPGAKIDGEALKKHLENRENFSLKGFREKFDLEPVGFNLFRSEWDEGTAEVM ERHGIPGAEVEFKRQKFASLKPPRKARGWEAKRQKPKYKSLWKYVKRIA A0A0B0DZ96 mL40 Neurospora crassa 0.041496336 1 LEVO MVSATKKPVSAMSAKNSTRHRKVSHKVTKTIATAKSQVISNKAMKIRTKSWKDMPSPKRRRRINAMVDELRLQGNVKMPK PGKSTYKAGGGERVRLVKAASTLPTPPLTPPVLSKPTGSASQSKGDLKPKRPTPEKKRSVSKRDVERFFLSTQTSTRRRE NTPIHAPIMSSTFTSLRGLATRLFAGGARPSPSSLLLPNKPATAALPTAIQHQQTASYASKGKSGPPAGMFSGQKAGSKK SKGPKQVDPRIINILRHFAVLSPKRIPPPLRFGRNRYLRHWTIHRAWLLFRRQQREQRERILMQQHQSMSNACEELRNTE GPGTRETGYLYRVAMLKNGVYGLKSIPIEYASRALVETPGRQAWNHEWKR A0A0B0DWX0 mL41 Neurospora crassa 0.011796603 1 LEVO MQPTRILQGLKYRKLRLTTKDVNKGFYKGNRTGSMGTHTSYGTYKIDYTKVRTYVCPDLTGFKLTPFVSKTIRPVHDQFP GDKLGPKNPATYLARWKSENGLD A0A0B0E3D2 L51_S25_CI-B8 domain-containing protein Neurospora crassa 0.015126692999999998 1 LEVO MTVKALTQISSAGRNGVGAFVLQCKKLDIHYSDWAGSSRGMNGFIKSLLPKFAAANPQIEFVVSPRPAKHPILMGHYING RTKAICVRNMEPLEILKKAELLRDASGEKPQKFKKPVTSTNPSVRGVWSPYHGQGMAV A0A0B0DUU4 Ribonuclease III Neurospora crassa 0.048106484 1 LEVO MKRIATPSLTSRLLVAARSGVSPATAAIRSRSAISVRSQSTAALAQHDASHDLNNDRFPPLEPLPPAAESLPSPLPERAL TSAKLAALHARLNLSPKIPLQTLARTLVDASADENPQFNNANLAFVGQTLINYHIAEWLLCKYPRLPQGILFSAMKAYAG PKPLLQIARSWGVDTAAVPGGEVDPGLLQFDALKPGVAITNFGYKRTELAYLEKFKWRRGMASRVVLDDDFGDVVRSDPK VAADLEKAMEEQDQDKTPDEEEAEMVANEQDQDVSYDRYGNPDTRAAAERAHAYFVRAVVGAIYAHCGREAAKAFVKAHI MSRTLDIAKLFEFKYPTRELAALCAREDFEPPVARLLSETGRQSRTPVFVVGIYSGSDKLGEGAASSLDHARFKAAMNAL KAWYLYSPGENPRVPSDMLEEGAKPWTPAYIDMGEVISR A0A0B0DPP2 MRP-L46 domain-containing protein Neurospora crassa 0.041322074 1 LEVO MSASSRGAALLRSQQRSICLQCRNQTRVLAPAGVTSAPRRFYSAEASATATATATATTTTTLPPPHPPVTTSTGTHAATS TSSQIYRIKSGVILTRPPLLTRDLTPFEESFYFYQKRLNERLTAPFRKDFYFKKDTAADLDWRIKLKERHGVPAKDIGRY NPRGRMAWNDEVLVGSQTSSRKHMVEKLLADAEMRVSEDGEEIPAEDRVPVEKPMPRRTEADEKGDVKRLDRALDKTLYL VVKKKADKEGEEAKWMFPTGVVPTDEGLHETAARILAESAGVNMNTWIVGRVPVAHHVVRPVFGQKDGALLKKGEKIFFL KGRIMAGQADLTDNLHDLVDFKWLTQEELRSTLAEEYFHSVKGMFAER A0A0B0DTN8 mL49 Neurospora crassa 0.018180738000000002 1 LEVO MFRSTFFGLSRAIVQPATPLTVRAAFQSRFYSAAAAASQPTTTATTTTPLQQQQQQQPTTQPTTPIQTQTGAAPTESTKP VAKPYLVGRAWTQRLPVYHLAKRGGNKKLTQIKKVQGDGQALRRDLAQFLGLEVKEVRVKVPTGHLEVDGHRREEIVKFL DGLGF Q7S518 mL50 Neurospora crassa 0.049748516 1 LEVO MRRIPRIPSTASALCSSSSSVASTSAAPLRTLRAAADSSSICQSCSFSTQTSATRNRVWQNTVQTQRRCASTVTETTPEA PVAAAAAETATESTETVEQQRKRKGGFFETQRQVNLVLPGQPTRADAPEKIRDPNYEPATSGAGLQEIGGMSDWWSKPEH FRDGGKQFEYQGFAPQEKITDPRLLKVILRRALAEGLALKKFGANPKNPADMASIIGNGDHWQRTVSVEMCRGENGELSL KNESDLQKVWILMRNAAEKTYYQREWQEEINRLRSLGEKEQAKQLLEEGKKLGYRLKSEEGSLVKLTVDEAVELRKSWNN DWKEAIIRDPVVKFYAAKRIQKMTGHILSDGKLTSIQTVANFMDALVTPPKPKKLAEQIEQSSILPELPNVKVYPRRVTP VDKERMVGRWKVIQKELQKRELPVLGTGNHGKYVELKWLGSKQ Q7S711 Probable ribosomal protein YmL44, mitochondrial Neurospora crassa 0.011128777 1 LEVO MLTRFITDVSTRFNPFSAKAKAARLFLSFLPPNARSNGMNITTQLLPRNSTETPLLYVKFKDGKEMNLDVENMGIKSIVE EVDRHSRILQKQADLNDG Q6MVH6 mL54 Neurospora crassa 0.023179601999999997 1 LEVO MICRTCLRRASGFARPAAAAATRPMVAASSRAAFSTTFSVCTPPAATPAAAAPATSTAEAGLAPVPGAATTEQAKAAISS CPAGTKLNGLNYFKNKADPVALPDEEYPEWLWRCLEVQKKTDDAADADAGDEFSKSKKQRRLAMKRARAQEAKILASGDL EALAPKIPLQKQSVNLPGAVNGGVQDAVLADEKREELRKAMRKERKAKIKESNYLKAM A0A0B0E0Q5 RNase III domain-containing protein Neurospora crassa 0.029625195 1 LEVO MAALTPSRSVFASTCKTIAQQCSRRPVAVQQLAAVPVARQVSSSSAVQQEQDASGTSSSQQPRPRWSYTPERMKGPGFSL NLVKDPRRKQWMVNSDPAKLDAFYDAFLGQGGSRMLSEETKWLAVTHKSFDYGRRGYNTRLAFLGRQIIALETTRSILTS PVLNEPIVDKYGRTPYNHAALANIDKLIYTQPLDIMDKTKIARMGIDFGLLTVMRWKPRMPEDLESSGVVVVLNSTLFAI IGAISLEKGAAVAQRIVREKILKRLGA A0A0B0E462 Related to ribosomal protein YmL20, mitochondrial Neurospora crassa 0.025439017999999997 1 LEVO MEASLSLFRPVATCCRRVALSSSSSSSQKAAAVAGISVRYQSTANRTKRMLNIPPHESFLNVPVEGDRIIFNPPSSEASV YHTPFKFLPRSDPRRRANIYKLFKPPQAPITTPESSSTDAAAADQHGDLPPVLYNPTKSYNVTPEQVEEIRELRAKDPKK YSVTYLSNKYNCTKVFIMMCTQAPREHQEQHKLARARTAENWGPRRAAAKLDARRRKEMLHRGEI Q8NIR6 Mitoc_mL59 domain-containing protein Neurospora crassa 0.018745025000000002 1 LEVO AATVKQHVQLALSLPPRLRTFLARYPPASILPAGADPETHKTPYQEESPNPFMPTKHPITGKWHNPKYSLRRQAELVKLA QEHGVEELLPFTRKLNEEKLRKRVELGLRVKGTGVGEKVKGHKHERTLVAKMEKRREAMLAMPDLIREWKKVGKRNWTKF PK A0A0B0DMU6 54S ribosomal protein L31, mitochondrial Neurospora crassa 0.013131485 1 LEVO MFGAFRFTNPLSGGLLWKIPWRMSKFQKLRQRRRLRAVDNVVATIENALAKKGETVKAVERWRAEMPTEAEMLPKDKYTI FDRKEKRYRKGIHKLPKWTRVSQRVNPPGY A0A0B0EF55 mL67 Neurospora crassa 0.032516111 1 LEVO MNSVTTSTIGRLAFGVSRLSAVTNVAGAVRHASTHPTTAIPKPTTAVLKTSPLAEETAVELKSPSRLQLKSEPGNKGNPK GHGDRIWAFHHIEQGQVIYSTKPVISHQHLIRQQPFTGKNLVPRKIRKDYWRPLAMIELAGKDQGAVGRSVYQKLREFKK RHELDWANEAEEGRKLMHKSKRERGQELNDQKPNSVADMAAVLAGAGKGNLMWQVSRLGSSSELVGEIKKASGAVEKGAV VDVKRQLRRATVYWTNEQDKFHAREWSDNVSHEVGIPGEAEKKRMPIRMSSE A0A0B0ECJ7 L51_S25_CI-B8 domain-containing protein Neurospora crassa 0.022734252 1 LEVO MVGVIRRLNVVRELLNIRAGPGAALLPKEVTKVHMQFAHRIEEGHMGPRKFWRENLPKLKYWNPAVPMVINRTTDQKGPA VMTIYFRDDKDAKPSSTPFPTSSADGSSPAPKPAQGERIVTIDMKNRNSSVILKEFLDKTGAVAVQPTAKDEEEFREFED LHRRSEIDRERIRKMNDAKKREKAMLAKAMSDAQSIKAASA Q7RWZ7 tRNA P/E state Neurospora crassa 0.023710057 1 GGCUGAGUAGCUCAAUGGUAGAGCAUACCGUUCAUAACGGUAUUGUCUGUGUUCGAUCCACAGCUCAGCCACCA bS1m Neurospora crassa 0.05159634 1 LEVO MAFSRGVSPGGALLRTSRMFSLPPVIPPPPGNKLQMISERASATEAYPTHQVLTTFESSRSRGDWGLKRPLPLKSTTGTT YPMVKVKEMDSLEQITDFTSGTQHGLTLKKFQALNIPISTPSEISDPSRLFRPVQRSVFEADTDVTAFSPDEQIQEAEKR WKFSGPWLAGMTPGEFKEYLAKTVRPKRAEFRKFIQKKIAAQKTEAANRELQETAALRGDAVAETQEPFKPESITDDEVT EYLRRLRNDNQVLYDLVGQFLDLAPLKPPQAAEARQHSLLVNLRATDSPYGGRGPPITHPSAGISYLRTAAYLNNHPIYG PQKSHPPVQARVLKPRRGGLGNDAKIGVAGFVADGPLGTSHSNLRGNSVMDKFDPSIEGGAKLWVNVDKATVDSTGRVQL TVSDAKATDVLIAKELIGDAREPIFGSAPKRQEKTFKKIPMTAARLRGRYENSDSPSSPTMSGSSGYGLR A0A0B0DJR9 Mito ribosomal protein S2 Neurospora crassa 0.047197304999999995 1 LEVO MIVRNIGARLGRRALATPLSRASFPAQSRFLSQDNFTAPPPPPTNSKKQAAKTAFAEPTLEEQAEFYAESIEKHTPEFAA SPAAEAWSAPSATATETVTTWDPSLVDEEALKLKQQIEAIPGNFKLFKQTKAQTQKLGAGVEVRYIPEQYLRNPPSDASL EDLMAAQAHMGHNTSLWNPANARYIYGVRQGIHIISLETTATHLRRAARVVEEVAYRGGLILFVGTRPGQRPIVVRAAEL AKACHLFTKWRPGTITNREQLLGGVPLTVVDELDRPLSGFEDHLHDRRPLAPDLVVCLNPKENMTLLYECSLAKIPTIGI IDTNTNPSWVTYQIPANDDSLRATALISGVLGRAGERGQKRRLEAAQRGVVTWKTPADVQGYFELASARAADARRRQAQD NSVEEQKEKDTFLSEDALKAMFGGDARI V5ILE0 Ribosomal protein S5 Neurospora crassa 0.058907285000000004 1 LEVO MNNTNTNTNNKNLASSSASVIFSKYINNNNNKLIPFKIKNSDLGRTRYFPPISKEWKNSIYVFNHNNLKNLPLFDININS LIKDYFNLQFKDKILFKKKRLSKVKVVSLNKIYASKAEIKHTNTKAILTVYTFNREKISLYKKIKKLKKSFYFVFDKIIS FSERVILSGVPIRVDKDGKVLSNLYLPFRLRGVLPWITESHVNIWRKIIIASLYKELILLRKYKLRLDLNKYKFEEKLLY RLNNLIMKYYNKKVEFNIVNMRSFLLNSDILTKILALKLKNRNARVIKIMDVILNKANLPKINRVQEKASLIKSVDWNLL ENKFKNLNLSFILNDASYAERNNLSELLNKLYYNVLLVSQKGVWALRSPKGEQPSFHSKSGGSPTKFIQKGAGAASLGGN AKAQPKVSSFAKAKKYAKIYQIIFNSINYKNMGGLRLEIKGRLTKRYRADRSLFKVKWKGGLKNLDSSYKGLSSVNMRGY AKPNVEYSIFTSKRRIGAFAVKGWVSGK A0A1W5YJW8 S4 RNA-binding domain-containing protein Neurospora crassa 0.051610031 1 LEVO MKIRRLFKYHSLKKKPIRPTWNKYNLYNLATAGREPRISGKTFFQQKWLAKSLTRAYHGEHIKERKWARMFSRRLPAVVN MDPAYMAKYNGSEQAAGRGSGLSEPPAYEKTADEKPAKQVIANPGRKVPTPYEQMTFAPLERRLDIAIFRALFASSARQA RQMVVHGAVTVNGKKMKHPGYLLNPGDLFQVDVERVLYATGAPKDKKLLAAAMKAAKKELAEEAQEAAEEKDAEAEEAEE GEAQEAASKSGKKEKQVDTSKFDEAWNRKYELLQLQRLLQYAKHIADSPSHQLSATRKQALRALKRDIKAAIKQAQRRDG SVSPTGNVVDDLTMLLERLAVSPSKAIQQEEAAKELSKKLDKQSRQVLKKVIEYNDEHEDNEIDPSKPYMTPWRPRNYMS AFAFIPRYLEVNQNICAAVYLRHPVARPGESEVPSPFSPTINQLAFNWYLRRG A0A0B0DXP8 Related to ribosomal protein S5 (Mitochondrial) Neurospora crassa 0.053297542999999996 1 LEVO MSAARFAARSFLSRRLAATVPAAAPAASTPAASTCPAAQQQQSQFHSSAHLEARRRSRFKNVRAVEMGLTSDAKIESFTK KKFAEYTEDEKAALAHNYPAEHMEAIEAAEAAIDPKDLTIQGRLRVDPYRMPYIDDFSEIQPIIDKRARRSAPPSHKARF MDVDEFTQDLINWADEIRRGEPTHRMKKLRDFVPEEFFEKPEGQWPKDVRDEAFTKFWAYLKEQKDADAKAAANATGPTD GDILSYILERSSMTDNNLQANSSLAPALPDKVPGVEGKYRNAIDPADDGLDDKGQYQELKKRTGMSVRQILQLKTKKLVH RRVVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPRYENRTIYGEVTTKVSGTIVRLN SRPPGFGLRVSHRIFEMCRAAGIRDLSAKFLRSRNPMNTVKATYQALLSQPNPEDLAIGRGKKLVDVRKVYYGGSVY Q8X048 Ribosomal protein S6 Neurospora crassa 0.013304392 1 LEVO MLYETIGIVRPGNIAEVKELVLTAGKLILNQGGVIRDIKNWGTFLLPRPISTNQQRHNRGHYFVMRYDASIATHEEVRRT MKADPRVIRTANVKLGDGKLETLSRFGAIPWRSLEEA A0A0B0DP65 Ribosomal_S7 domain-containing protein Neurospora crassa 0.033821913999999995 1 LEVO MPARLGLSAAFRSLSIRTNQLPQQQSIAAAVQARTLITDSTTSSRLPPRVQIQQQQQQRTQPYSTETTPPPNSNNGDLAG IEGQPPVEVTPENAAALSQLSEIAYGVKAADVAIEGHKYGLPTLPLPSELHHKYRYSEVVNHATKLLMKDGKLSKAQRDM AMILNYLRSSPPPKLNPSRPLIPGHPPASHLPLNPVEYLTVAIDSVAPLIKMRGYKGLAGGGRSLEVPQPIPARQRRSTA FKWILDVVNKKPSKGSGRTMFAHRVAEEIVAVVEGRSSVWDKRMLIHKLGTANRANLNSPALQLKGKRF A0A0B0E7P2 uS8m Neurospora crassa 0.017743706999999997 1 LEVO MGIQQITNMCSHLQNASRARLGLTSLPNTKYNLALALALHRAGFISSITRGGPHPPTPEALMTYEPEPVTSANVATRRLW VGLKYWNEEPVLKELKPISKPSRLVTASLEQLNRVARGFPAGYMKGLQLGECLFVNTDRGVLEVREAVERKVGGLVLCKV K A0A0B0EEW5 uS9m Neurospora crassa 0.03531957 1 LEVO MMASLRHSITSALRSSRQGCSKSAQWQSLDQQFGALRISSRSLSTHAHDHNPNVDGQFIAAPALSIDNFKLHPYARAVPV SPSYFTRTPRFYDNYLSLEKLMEEYEDLPVIPATAVERVAWKTLEDIRKELGEQVKASEFARCLALVKRLNSIHPDLKPQ EIKDVLDSFRRNVQPFTNVAKPIPIDQFGRACGVGKRKASSARAFVVEGTGEVLVNGKTLAEYFGRVHDRESAVWALRAT NRIDKYNVWVKVEGGGTTGQAEAITLAIAKALLAHEPALKPALRRAGCVTRDPRKVERKKHGHVKARKMPTWVKR A0A0B0ED13 30S ribosomal protein S10, mitochondrial Neurospora crassa 0.03037707 1 LEVO MIIRPVVRSLQGRAPLATLRSAQSVFQPLPQLRRNASVTTGPDAASKASTTPIARITTTTEAPKDQKKAKAAAAAAAEPE EQEVIMSRMPRSLEALYLQPLRREAEYGVPSCDLQLRSYSIRNLEFFCDFALRAAYYLGLPAFGPVPLPRMIERWTVPKS HFIFKKSQENFERVTLRRLIQIKDGHPETVQLWLAFLQKHAYYGIGMKANVWEFSKLGVSKAMDESKSEVEKLLETRWEH LSHVSDMKGVGNFEDFLAKERLRISGGR A0A0B0EAU9 Translational machinery component Neurospora crassa 0.042159832 1 LEVO MAGQIDPIRAELVGWTPRVPRNLLASLPPLGRKTAPKLPQNISFSPPLSAHPCYQCQEKCLPHRRPVSWSPLILQRCRLR CLPRGHPLKISRTFELPVGERDGSHPLTAFARAPRTTEPRSLHYLYDSLPPTPALCAQLLFHQLIQGHFSFVVHPTVATA PRSIWPAKMSRFSTGRLLAQNLFQAFNKPVFPSATPVWTRAFSQTAARRDADSESSAKLMESLTRGIVGMAADPTDLTGD KLATNIGLRDTEDEPYHFHIYSHKHNTHITVTKPNRDALISLSCGNLGFKKSNRKHYDSAYQLGAYVVDKMHQMNLHNKI KKMEVVLRGFGPGREAVIKVLLGNEGRMLRSSIVRVSDATRLKFGGTRSKKPRRLG A0A0B0DQD8 Ribosomal protein S12 Neurospora crassa 0.018657877 1 LEVO MATTFLRNLFSQAQPSLLRRPLMPSSSSILPAAARLFSSTPAQNATLNQVMRGCRKPQRARHAVSPALSSIKSPALKGVC VKVGITRPKKPNSGERKTARVRLSTGKVITAYIPGEGHNISQHSVVLVRGGRAQDCPGVRYHLVRGALDLAGVATRMSSR SKYGTKKPKKASVG A0A0B0DQD0 Probable ribosomal protein S13 Neurospora crassa 0.013503821 1 LEVO MVFILGVNFNEHKLVQKALESFYGLGQQASARILAKYSIHPRAKMGTLPPKIVTALTAELSTMTIENDARRLVLDNIKRL RDMGTYRGRRHAMGLPVRGQQTRNQIANARKLNKIERHG Q6MVY0 Mitochondrial 37S ribosomal protein MRP2 Neurospora crassa 0.013210643999999999 1 LEVO MSMFRAKKLDLGCFTNVRVLRDHSKRKAFLEAEPERQALRYVIRNTTLPARTRAVAQLQLTQMHAYTRPTQIRNRCILGG KSRGILRDFKMTRYNFRMNALMGNIPGVKKASW A0A0B0DHJ1 Related to ribosomal protein S15 (Mitochondrial) Neurospora crassa 0.035803987999999995 1 LEVO MPPRLPGPQGLRSLTLCLRPAVASPAQALQPLIQTANISQKEKKRKMKQDPYGWAQAQQRKAVNVKRQAELQAQRDAAWG DPVKGITTPFVESFDSAGQASVSPPKVGPDGQLVEEPKPLPTSPHLRNYLLNKDEFDSAIQYAEHILKPIKAEDRLTADP EKEDEEAREHAARHAKAVAALERIAKLEHGGAKDRKHANIRRCIETFGRHITDQSLERPTPPLARGVEPKPQPVRAGPDT GSSEVQIAILTSKIRALSKALEGHGGNRDKNNKRSLRRLCHKRQRLLRYMERKERGSGRWHHMLETLGLTPATWKGQITL Q8X067 bS16m Neurospora crassa 0.012140165999999999 1 LEVO MVLKLRLARFGRTNAPFYNIVVAHARTARNSKPLEVIGTYDPVPKKDTYDTTGKLHKDIKLDVTRAKYWIGVGAQPTDTV WRLLSLVGILDPKYKKPQPAQEQKTKA A0A0B0DKS9 uS17m Neurospora crassa 0.018505701 1 LEVO MASTIAAATKVSRKMFRELHGVVVTSGLIDKTVKVRVGGQKFNKFLQKHFDDPKQYLVHDPNNSLRAGDVVAIMPGFITS KSKRHVVKHIIAPAGTPIEERPPIPSLDELWDAKDAAKAAKKERKVLREKMQAAEEAIELAERMARHAVREIAMREKIIS LQKVD A0A0B0DJ04 Ribosomal protein S18 Neurospora crassa 0.028468594 1 LEVO MSSSRQFLSSALRQCRAAGQRTAQFSTTSPAAAIRDIPTTSFQNAPRTNTNTSSPSSNNNNNAGSSQYKSDMFNLLNSGA GSRGGRDSYNNARDVDGGQRYGSNSQKVQELLQSEVTSNNYMRMMRRRWNNGDVYAPRDLSPYEMKGRNGGWVEAADVVD ELGFSPLDNYRNFSLISDYITPFGRIRHSKETGLKPVNQRKIAKMVRRAIGLGIHPSVHKHPEILKNSNGRHLLPLVVPK GQKANKTKNFDGEDEN Q872A7 Ribosomal protein S19/S15 Neurospora crassa 0.010408332 1 LEVO MQPTRVLFKRSVWKGPHIVPLPIQRPEPGKKIAPIRTQARSATILPNFVGLKFQVHNGKDYIDLTVTEEMVGHKLGEFSA TRKPFIWGKKK A0A0B0DRW6 bS21m Neurospora crassa 0.025679785 1 LEVO MELRSALQSVCRTTAAAASASARSSLAGRHAFSTSARFQLQPPPNPYVSGKSRIETLRAALSNRKPAAGAAAGGSPGATS ASSALPPRPPTANDSPWSIVDAINKDSNSSTSSSSSSSSSGGALYSSSKPSPMQTWNETDFETRHMAPQQELNIRLRPST GRTFYVSGHQDFAGALKLLHRTVAANKVKKDVRLQRFHERPALKRKRNLRERWRARFKEGFKAAVNRTFELKNQGW A0A0B0DTH5 37S ribosomal protein S25, mitochondrial Neurospora crassa 0.029553588 1 LEVO MGKGRIFQAAKVYQRASEAAATNIVSGLPPRNPPLWLKAIESIPPAEINTRPYPIQHSPPNPRARKPRNLFRPTKIVYPE DELRRDFYRDHPWELARPRMIIELDGKDARFLDWSKGLRQRGIPLSGERHGNWMLTRIANDSVVQRQLWLMENQGMTKQE AYDKARHEFYKLRQLEQMERRIAVEEARMVGGYFGKDLLTVGMELENKTYESWKKWATTEIARQESARASMYTNVVDNSA LEESEEDELLAQN Q873E4 mS26 Neurospora crassa 0.035312183999999996 1 LEVO MAPTLARPSLSGVQFILSSPTTTCAATSVVTRAIAARSFSTTRSARDSVSIPPDSPNYIKVPEPPQSSEVRHPFVKGHLP IPRSIFPKKGVPEKVQSGYVNRIAPKSAAELAGLPPKSKQESWRRKMAEARRQSLEAGLQGLWQRKVKRDQKQAKESKAR YLANKRAAQAPERLDEVFTRATIRESTAKNTFVPLDPEAFVKAEEARIKHAEKEAMKSEARRDAVVQLYVASKNFIVDEK ELEEHVNKHFTEKIHNAGLWESGRSIWDSQKNPISMRELRNEFSGFNDRVTATTSAAVKTTVRQKNVAEELTGGKL Q7SHR9 mS27 Neurospora crassa 0.044923723 1 LEVO MAGRAPQHALRVGCRAVPEALSKPAQQSRCLSSTVPRQATYPVVSFNKTSSPELKEALETLREKVILPTYLPPELRQKIF NKKYEKELAHDPVTIQIDGQPQRFSYINMLTDMPNTPKNIRAALLSMKNGGDFANLSGLLEGMHRANRKLPYWLSAQIVR KACKAGHLQLILNMVRDVKRTGFTLERHETVNELLFWIQRFAWKSDYSEPETRKALREVQEILDALEGDERHMSKDRKRQ QALTRFPYHRDPQFLAARLNLTAELAARRAVTGQTSEQQLNSANDVKNLVKYAEQLVRLWPADKALLDMYTDEAYVARVD LRYLIKPQVHLRYASFTLQALKNAAKIVGQLGHGPLAAQLINRAAAVEAESQLAYAKVDDGMAGQKIYEMVVGGKK Q7RYW7 Mitochondrial ribosomal protein DAP3 Neurospora crassa 0.051451413999999994 1 LEVO MSASNCLRCLVRPSAVALVPRQMLQVGGGSLTFTATAATKGASSANTGGRQNANRPQKLRFKKTKKKNVVSSGKPPLPGE RKAYRKKIVLSNNNALPVPGLETLRPNDLAKQDNVGSVKALPEDVVDALRAMEAFKPTQCWGIFRQPSVLIRQETVDLTK KMKAAGADGKTIRMVIEGNRVTGKSLLLLQAMTHAFMNDWVVLHIPEAQELTTAVTEYAPIENSPLWTQPTYTLKLLQSF KRANEKVLSRMNTVYSHADLPQIIPVNSPLLQLINSAKEADGAWTVFQALWRELNAENVPGRPPILFSLDGLAHIMKVSD YRNPAFELIHSHDLALVKLFTDCLSGATVMPNGGAVLGATTRGNSPRSASMELAIAQREAEKAGEKEVPQRDPYSKKYDD RVEAVMKSVEILRLKGVSKTEARGLLEYWAASGMLKKRVDESMVSEKWTLSGNGVVGEMERASLLTMKA Q7SD06 mS33 Neurospora crassa 0.012169154 1 LEVO MSVPRARLLQLVKARCELFSTTFNPEGIRTGNKILRQRLKGPALATYYPRKNVGIRELQKEFGTLGLEVDDEVDDDRLEH LAALRARDKGAPKKKRTAPSAADAKKKK A0A0B0DU00 37S ribosomal protein S24, mitochondrial Neurospora crassa 0.04405708999999999 1 LEVO MASSANALRLGLRTCSRPTQTSNLRIAALQRRALSATATRCEGVPVPKREDDAKLEFTRPYNPGEFLSEKLRSDDLQDWE RERYERALTSWEQTPDDLKRGWSTMIRDIEQAAAPLRRVVMPRRSTFWYEEEKDTDLITNEDGEDDFHENDIMSLGHGKL EEHREFREYARIAVWEMPLLSKYAKPFVPPTSEEVLRFRYTTYMGEFHPADRKVVVEFCPKDLRDLSEVQQRKLMKLAGP RYNPEKDIIKMSCEKFEHQAQNKRYLGDLIEKMIAAAKDPKDTFEDIPLDTRHHTFTKKISFPKEWLLTEERKKELEAAR QQALLKDAEKVVQGALVDGADVVKQYLESGAAEALHAVPVMAGRGGKALPGGKGGKMQRSKR Q9P5J2 37S ribosomal protein mrp10, mitochondrial Neurospora crassa 0.009907533999999999 1 LEVO MPNKPIRLPPLKQLRVRQANKAEENPCIAVMSSVLACWASAGYNSAGCATVENALRACMDAPKPAPKPNNTINYHLSRFQ ERLTQGKSKK A0A0B0E339 DUF1713 domain-containing protein Neurospora crassa 0.03812625 1 LEVO MIPQSVRRVVAAAPQSPVVSSLAASSAPRAGASYILSSYQPNALQKRRYSSSKPSSPDDGSSRAFAARASVPAAGTSKTP GEKRKRKAKEPVMPPLPSVPSTRHIKDEALALSTFFALHRPISVTQLLPKTVTEESFAEIFNHRKGHKATDVLSTLSQAV HDLESPMSGLRLSDNDVEDGSTKISLKHPDGTESDVYFQLNSMSGHFLPFNPPPPPEPIAEVDEAAAEAEASAAIAEEIA ATAEQEPETRVYKAVVTIEETRDTNGQYKIMAHSPQLVEDDAVQPRSFLERLALRQIRYEEARQQQGIMHAISVRRQKKL KIKKKKYKKLMRRTRNERRKQDRL Q7SHR6 Protein FYV4, mitochondrial Neurospora crassa 0.026612898 1 LEVO MKSSLRIQSTLGLLFRPCAVSAPATAPGLNAHARWAHKTAAQLPLIPKPTPFVPDVPTFLTLIGRDLKQHADKFPTWEAL FTLTTDQLRELGVEPPRARRYLLRWRQRFREGKFGIGGDLKHVENGVAYLKIHEKEASPTRTSRRVVNVPANQHVEEVSE GERVKVKGYKVKGVSTIVGPYALPVQKGVAKLAVTEGMWEDKRGHKVDGGERRRAEVRFKRGVAERKALREKMGFY Q9HE52 Manganese and iron superoxide dismutase Neurospora crassa 0.034270785000000005 2 LEVO MIGSMGLRIPRATSSLLGRAVNAVATNQSAVAGASIAAQRRWQHYLMPLRDNFEQEGIRNFLSPGSVNMAYTEYQTFILE KLNALVVGTDFEQKDTKSIVLATARDPELAHVFNHASMAHNNHFFFDHLSPVPVKMGDKLFYHINENFGSVDTLRDEMIG TAVSMFGPGFVWLVRTQLPGQPVALRVMATYLAGSPYPGAHWRRQEMDAQTSIGSSPQGLSNGQRFFERSAAGFKGNKLE PTAPGGTDLIPILCLNTWEYAWLREYGTGVGGMGGKLAYAQSWWNMIDWAKVEEEARLETRILTGGDSSV A0A0B0DM95 mS45 Neurospora crassa 0.039274625 1 LEVO MPPRIPNAPSSLLLQSSACSGSSSRCTASRLPTWASSCSSSSPQSSQPTTHQQQCSSFSTTAPAHVQSVRRQKMFSWLDK KGSAYKEHTRQGPNLLGGQGKDGLAVPFPNNPYFKSQPVLSEGSREIIYQDVMEKGLPIKAVSAKYNVDVRRVAAVIRLK EIEKRWIKEYKPLARPYARAVMKMLPQTVLGGPDQKPHESINDVHVHSYTTQQLFVPVSESREFTREDAAKAFGDHILPV DKKLRVPELIEFQKDLLKEVPLQEANRKFLNATAASEAKIAEREAKRRQAVEDAITRVKTDRFEFRFQEFNAENVGHDGR DRNAVGWRYGVPFPDRKRSQIKIPTKVE Q7SHB2 mS46 Neurospora crassa 0.043112672 1 LEVO MNRQVVTSTLGRRGVASTILNAQQQQRPFSSTTTRCAAEDDSKKPAAAPSTPRAAAPGPISASRQKSEAAVGKLTQLRGS FTSLTNDNSFHKTLPAGARDARRLAAAPIAGKGAGAGAVAPLGGGGGASGAPKVINVRSLKGTLGSRGSNNIPGAVAPGA ALRPRFAAGPGAAAGRPRFGAAASPGAGPTGAARRPPFGARRARPAGDKKRSGGSGDKRPRGDDYDAPPTEEEKAFLRGL EQGKVTEYVPKLTPDTLLGYGPPVATDAALGKVESAMRTMRILGGGLPFNDQSGVTSDPTAIKHRYVHEKKPVFFSSVEE KEWVRESLDKFAVSEGPEKKTKQKILETSVLGKYEEPKYVESLTETVKMVEKYQGGTFSYAPSDADKFNKKLNQLLAAGL PRAAPAPAQAQKKA A0A0B0DYB0 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial Neurospora crassa 0.056401190999999996 1 LEVO MLVSKSIASRAGLASAVASRSCRPSFTAMPLRAKVLGQQAPISTQAAAELFKPVEGDEPEDVLFNSLYNLRSVELNRPAK YNALNGSMIRKIAPRLLEWERSDMANVIVIKGSGEKAFCAGGDVAALAKQNAEGPEGVKKSVDYFGLEYKLNHLISTYTR PYVAFLDGITMGGGVGLSIHAPFRIATERTVFAMPETKIGFFPDVGASFFLPRMPGQVGPYLGLTSALLKGVQVYYAGIA THYLHSSSLPALESRLAELTPRDYWTIEQRLSVINDTIEEFSTGVPYDENIEIGGKIRLAIDRCFKYDKIDEIIAALKEE AAEGAKGGVQSWAKNTLEELTQRSPTSLHVTLRQMRLGKSWGIAHTFKREHQMAAKFMKSHDFNEGVTALLIDKGANGPA KWKPASLDEIPPGANISEDYFRNDPEVPVLELLNDRSYMQYPYNKFGLPNDYDVKEAIEKGNFTREKLIDHFVETRRGKQ GVREAVSDVLDRMAVRSKGTEHVQWKKE Q9C251 3.1.2.4 IF1 Neurospora crassa 0.010664098 2 LEVO MLRTTVSKLARPTVSRAFATTSRALAGETGAPPKTGGPGDAFQRREKANEDFAIRQREKEKLLELKKKLAEQQKHLKTLS DHIDEITREQGGERN A0A0B0DIK4 16S rRNA Neurospora crassa 0.600339375 1 GAUGUAAUAAAAAAAAUUUUUUUUAAUUUUAUAUUACAUCAAUAAAAAUAGAUGAGUUUGGUGAUGGCUCUGAUUGAACA CUGUCCAAAUACUUGACACAUGCUAAUCGAACGUUUAAUUUUGGCCUAAGAAAGGGGUUUCAUCGUGGCUUAAGCUAAGG GGUUUAUUGUGGCUUAAGCUAAGGUUUAAUCUUUGACUUAAGCGGGUGUUUUAGGGGAACUUGUGCCCCUAAAACCUCUU AAUUAAAAGUGGUGUACAGGUGAGUAUAAUAUUUUUUCGCUUAACUUAAAGUGAAGGCAAAUCCUUCAUAUUGCAAAAGG AUAUCUUAGGCACCUGUUGAAAGGGGCCUACUUAUAUUAUAUCCGCUUUAAGAGGAUGAGAAAAGUUUCAGAGAUAGGUA GUUGUUAAGGUCAUGGCUUAACAAGCCAAUAAUUCUCUUAGUCGAAGCUGAAAAGGCUGAUCGACCACAUUGGGAAUGAA AAAAUCCCAAGGCAAAUAGGUACAGCAGUGAGGAAUCUUGGUCAAUGGGCCCACGCCUGAACUGGUAACUUGGAGGAAUG AGGGGUCAACUUUGCAAAUGGAUGAGUGAUCGUUAGAAGAUCCUUAGUCCCCUGGUCUUCUUGACACAUGAGGUAUAUAC UUCUAGUCCAUAUUGGGGGGAGACUCCACGUCGAUUUAUCGAGUAAAAUUCUGUAUACAUAUUGAUAAUGACAAUAUGUA CAUUUGUCUUGACUAAUUACGUGCCAGCAGUCGCGGCAAUACGUAAGAGACUAGUGUUAAUCAUCAUAAAUAGGUUUAAA GGGUACUCAGACGGAAAAAUUCGCCCAAAUAUAGGGGACAAUUUUUCUAGAGUUUUAUGUAAGAAGGUCGUACUCUAGAG UGGAGAGAUAAAAUUCUGUGAUACCUAGGGGACGGGUAAAGGCGAAGGCAAUCUUUUAUGUAAAAACUGACGUCGAAGGA CGAAGGCAAAGGGAACAAAAAGGAUUAGAUACCCCAGUAGUCUUUGCAGACAAUUAUGAAUGCCAUAGGUUAGAUUUUUA AUUUAGUCUAUAAAUGAAAGUGUAAGCAUUUCACCUCAAGAGUAAGGCGGCAACGCAGGAACUGAAAUCACUAGACCGUU UCUGACACCAGCAAUGAAGUAUGUUAUUUAAUUCGGUGACCCACGAAAAACCUUACCACAAUUUGAAUAUUAAUAAUAAU GAUAUUAUUUUUUAUGCUUGAUAUGGCAAGCACUCAAUUUUCCCCUCCCCGUAGGUUUGCCGCGGGGGGGGAGAAAAAAG AAAAAUAAUGGAUAAUAUAGUAAAUACCAUAUUCCAACUAUAUUUAAUUAUUAAUACAAGUGUUGCACGGCUGUCUUCAG UUGAUGUUGCGAAACUGUGGUUCGUUCCAUGGAAUUAACGUAAACCCUUGCUUUAUUUGUAAAUAUUAUAAAGCAGUUCA CCUUUAUAUAGGAAAUGAUAAAAGGGAUCAAGACAAGUCAUCAUGGCCUAAAUAUUGUGGGCUAUAGACGUGCCACAUUU UCCUAAACAAAGAGAUGCAAAAAUGUGAAUUUUAGCUAAUCUCAAAAAAUAGGAUAAAAAUAUACAAGGAUUGUAGUCUG AAAUUCGACUGCAUGAAUAAGAAAUUGCUAGUAAUCGUGAAUCACCAUGACACGGUGAAUAUUCCCUCGGAUUGGUACUA ACCACUCGUCACAUGCUGAAAGGAGUGCGUGCAAUAAGUUUGCUUUUCUGUUAUAAGUAAGUAGACAUAUAGGUUUAGAU GUUAUAAUAGGAUCCUUCGUAUGCGCGGCUCUGAUUAGUGUUAAGUCGAAAUACGGUUCGUGUAGUGGAAGUUGCACGGG ACUUAUCAAUGUUGAACAAUACGA mRNA Neurospora crassa 0.0034540659999999996 1 AAUAUUUAUGU MAGNESIUM ION 2.4305e-05 242 MG SPERMINE 0.00020234 1 SPM POTASSIUM ION 3.9098e-05 55 K ZINC ION 6.5409e-05 2 ZN NICOTINAMIDE-ADENINE-DINUCLEOTIDE 0.0006634249999999999 1 NAD ADENOSINE-5'-TRIPHOSPHATE 0.000507181 1 ATP singleParticle particle 7.5 20.0 HEPES-KOH 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid-KOH 15.0 KCl Potassium chloride 15.0 Mg(C2H3O2)2 Magnesium acetate 0.05 DDM n-Dodecyl B-D-maltoside 0.0075 Cardiolipin 1,3-bis(sn-3-phosphatidyl)-sn-glycerol 2.0 DTT Dithiothreitol Quantifoil R2/2 COPPER CARBON CONTINUOUS 2.7 ETHANE 100 277 FEI VITROBOT MARK IV FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 70.0 130000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GIF Quantum LS 20 GATAN K2 SUMMIT (4k x 4k) COUNTING 1-20 3172 35.0 1 EMD-3551 2.99 FSC 0.143 CUT-OFF RELION 37908 PROJECTION MATCHING RELION PROJECTION MATCHING RELION RELION emd_10965.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 423.99997 423.99997 423.99997 90.0 90.0 90.0 Z Y X -21.693401000000001 37.643635000000003 -0.0007842725 1.2172554 1.06 1.06 1.06 0.0258 AUTHOR ::::EMDATABANK.org::::EMD-10965:::: emd_10965_msk_1.map emd_10965_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 423.99997 423.99997 423.99997 90.0 90.0 90.0 X Y Z -0.24187022 0.42809123 -0.0000820509 0.0117949005 1.06 1.06 1.06 AUTHOR ::::EMDATABANK.org::::EMD-10965:::: Consensus map of the mitoribosome from Neurospora crassa with tRNA bound in the P/E state emd_10965_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 423.99997 423.99997 423.99997 90.0 90.0 90.0 X Y Z -0.066099584 0.12918891 -0.00006013989 0.008499327 1.06 1.06 1.06 AUTHOR ::::EMDATABANK.org::::EMD-10965:::: emd_10965_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 423.99997 423.99997 423.99997 90.0 90.0 90.0 X Y Z -0.059953276 0.12989801 -0.00005453477 0.008438242 1.06 1.06 1.06 AUTHOR ::::EMDATABANK.org::::EMD-10965:::: Consensus map of the mitoribosome from Neurospora crassa with tRNA bound in the P/E state