2025-07-02 REL PDBj INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY REMEDIATION REPOSITORY Carbohydrate remediation STRUCTURE_SUMMARY atom_site chem_comp entity pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_assembly_gen pdbx_validate_close_contact struct_asym struct_conn struct_site struct_site_gen _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_seq_id _atom_site.label_asym_id _atom_site.label_entity_id _chem_comp.name _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_struct_assembly_gen.asym_id_list _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.auth_seq_id_2 _struct_conn.pdbx_role _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id DATABASE_REFERENCES citation citation_author database_2 _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _database_2.pdbx_DOI _database_2.pdbx_database_accession STRUCTURE_SUMMARY chem_comp_atom chem_comp_bond em_admin pdbx_entry_details pdbx_modification_feature _em_admin.last_update _pdbx_entry_details.has_protein_modification DATA_COLLECTION em_admin em_software _em_admin.last_update _em_software.name EXPERIMENTAL_SUMMARY em_admin em_software _em_admin.last_update _em_software.name PDBj PDBj 2019-09-12 2020-01-22 2020-02-05 2025-07-02 National Science Foundation (NSF, China) China Cryo-EM structure of human IgM-Fc in complex with the J chain and the ectodomain of pIgR Li Y Wang G immunoglobulin, pentamer, transcytosis, secreted, IMMUNE SYSTEM Li Y Wang G Li N Wang Y Zhu Q Chu H Wu W Tan Y Yu F Su XD Gao N Xiao J Structural insights into immunoglobulin M. Science US 367 1014 1017 2020 32029689 doi:10.1126/science.aaz5425 1095-9203 0038 SCIEAS 6kxs FULLOVERLAP Ternary complex of IgM-Fc with the J chain and pIgR/SC Ternary complex of IgM-Fc with the J chain and pIgR/SC 0 3 Homo sapiens Immunoglobulin heavy constant mu Homo sapiens 0.041875766
N-ACETYL-D-GLUCOSAMINE
10 Homo sapiens LEVO ASAWSHPQFEKGGGSGGGSGGSAWSHPQFEKIDTTIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLR EGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPPS FASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDL PSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPG RYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY P01871 Immunoglobulin J chain Homo sapiens 0.015483328999999999 1 Homo sapiens LEVO EDERIVLVDNKCKCARITSRIIRSSEDPNEDIVERNIRIIVPLNNRENISDPTSPLRTRFVYHLSDLCKKCDPTEVELDN QIVTATQSNICDEDSATETCYTYDRNKCYTAVVPLVYGGETKMVETALTPDACYPD P01591 Polymeric immunoglobulin receptor Homo sapiens 0.061371875 1 Homo sapiens LEVO KSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIA QLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVID SSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCA LGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSP IQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEE PGNGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKW NNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERHHHHHHHH P01833 2-acetamido-2-deoxy-beta-D-glucopyranose 0.000221208 10 NAG singleParticle particle 0.4 7.4 ETHANE 100 277.15 FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 GATAN K2 QUANTUM (4k x 4k) SUPER-RESOLUTION 59.74 1 PHASE FLIPPING AND AMPLITUDE CORRECTION C1 3.4 FSC 0.143 CUT-OFF 1183008 PROJECTION MATCHING PROJECTION MATCHING emd_0782.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 320 320 320 0 0 0 320 320 320 264.96 264.96 264.96 90.0 90.0 90.0 X Y Z -0.09893445 0.1187983 0.00022054034 0.0025811617 0.82799995 0.82799995 0.82799995 0.01 AUTHOR The primary map. emd_0782_msk_1.map