2024-11-06 REL RCSB RCSB RCSB 2019-02-11 2019-03-06 2019-03-27 2024-11-06 National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI) P41GM103832 United States National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI) R01GM079429 United States National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI) S10OD021600 United States Helicobacter pylori Vacuolating Cytotoxin A Oligomeric Assembly 2b (OA-2b) Zhang K Zhang H Helicobacter pylori, vacuolating cytotoxin A, pore-forming toxin, TOXIN Zhang K Zhang H Li S Pintilie GD Mou TC Gao Y Zhang Q van den Bedem H Schmid MF Au SWN Chiu W Cryo-EM structures ofHelicobacter pylorivacuolating cytotoxin A oligomeric assemblies at near-atomic resolution. Proc. Natl. Acad. Sci. U.S.A. US 116 6800 6805 2019 30894496 doi:10.1073/pnas.1821959116 1091-6490 0040 PNASA6 EMD-0542 other EM volume EMD-0543 other EM volume EMD-0545 other EM volume EMD-0546 other EM volume EMD-0547 other EM volume EMD-0548 other EM volume EMD-0549 other EM volume EMD-0550 other EM volume EMD-0551 other EM volume 6nyj FULLOVERLAP Helicobacter pylori Vacuolating Cytotoxin A Oligomeric Assembly 2b (OA-2b) Helicobacter pylori Vacuolating Cytotoxin A Oligomeric Assembly 2b (OA-2b) 0 1 Helicobacter pylori 60190 0.088 Vacuolating cytotoxin autotransporter Helicobacter pylori 0.08846321099999999 12 LEVO AFFTTVIIPAIVGGIATGTAVGTVSGLLGWGLKQAEEANKTPDKPDKVWRIQAGKGFNEFPNKEYDLYKSLLSSKIDGGW DWGNAATHYWIKGGQWNKLEVDMKDAVGTYKLSGLRNFTGGDLDVNMQKATLRLGQFNGNSFTSYKDSADRTTRVDFNAK NILIDNFLEINNRVGSGAGRKASSTVLTLQASEGITSSKNAEISLYDGATLNLASNSVKLNGNVWMGRLQYVGAYLAPSY STINTSKVTGEVNFNHLTVGDHNAAQAGIIASNKTHIGTLDLWQSAGLNIIAPPEGGYKDKPNNTPSQSGAKNDKQESSQ NNSNTQVINPPNSTQKTEVQPTQVIDGPFAGGKDTVVNIDRINTKADGTIKVGGFKASLTTNAAHLNIGKGGVNLSNQAS GRTLLVENLTGNITVDGPLRVNNQVGGYALAGSSANFEFKAGVDTKNGTATFNNDISLGRFVNLKVDAHTANFKGIDTGN GGFNTLDFSGVTNKVNINKLITASTNVAVKNFNINELIVKTNGVSVGEYTHFSEDIGSQSRINTVRLETGTRSIFSGGVK FKSGEKLVIDEFYYSPWNYFDARNIKNVEITRKFASSTPENPWGTSKLMFNNLTLGQNAVMDYSQFSNLTIQGDFINNQG TINYLVRGGKVATLNVGNAAAMMFNNDIDSATGFYKPLIKINSAQDLIKNTEHVLLKAKIIGYGNVSTGTNGISNVNLEE QFKERLALYNNNNRMDTCVVRNTDDIKACGMAIGNQSMVNNPDNYKYLIGKAWKNIGISKTANGSKISVYYLGNSTPTEN GGNTTNLPTNTTNNARFASYA Q48245 singleParticle particle 0.2 7.4 CARBON CONTINUOUS
unspecified
 ETHANE 100 FEI VITROBOT MARK IV
VacA OA-2b
 FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 70.0 2.7 1.3 2.5 130000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GIF Quantum LS 20 GATAN K2 SUMMIT (4k x 4k) COUNTING 1-30 3 13708 6.0 7.0 1 540214 D6 3.2 FSC 0.143 CUT-OFF cryoSPARC 2 47009 MAXIMUM LIKELIHOOD RELION 2.1 MAXIMUM LIKELIHOOD cryoSPARC 2 10 RELION 2 emd_0544.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 384 384 384 0 0 0 384 384 384 407.03998 407.03998 407.03998 90.0 90.0 90.0 X Y Z -1.7319936 3.0986722 0.008191676 0.0902079 1.06 1.06 1.06 0.36 AUTHOR Helicobacter pylori Vacuolating Cytotoxin A Oligomeric Assembly 2b (OA-2b) BACKBONE TRACE