PAN-proteasome in state 1

2024-05-15 REL PDBe PDBe PDBe 2018-08-20 2018-12-26 2018-12-26 2024-05-15 PAN-proteasome in state 1 Majumder P Rudack T PAN, Proteasome, AAA-ATPase, Archaea, hydrolase Majumder P Rudack T Beck F Danev R Pfeifer G Nagy I Baumeister W Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle. Proc. Natl. Acad. Sci. U.S.A. US 116 534 539 2019 30559193 doi:10.1073/pnas.1817752116 1091-6490 0040 PNASA6 6he8 FULLOVERLAP PAN-proteasome PAN-proteasome 0 1 2 3 Archaeoglobus fulgidus DSM 4304 1.25 20S-proteasome 1 1 2 Archaeoglobus fulgidus DSM 4304 Proteasome-activating nucleotidase (PAN) 1 3 Archaeoglobus fulgidus DSM 4304 Proteasome subunit alpha Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126 0.02715616 14 Escherichia coli LEVO QMGYDRAITVFSPDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEADTIEKIYKIDEHICAATSGLVAD ARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVDEVPKLYETDPSGALLEYKATAI GMGRNAVTEFFEKEYRDDLSFDDAMVLGLVAMGLSIESELVPENIEVGYVKVDDRTFKEVSPEELKPYVERANERIRELL KK O29760 3.4.25.1 Proteasome subunit beta Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126 0.022132283 14 Escherichia coli LEVO TTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIA TLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRA IYSAMKRDSASGDGIDVVKITEDEFYQYSPEEVEQILAKFRK Q9P996 3.4.25.1 Proteasome-activating nucleotidase Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126 0.044102976999999995 6 Escherichia coli LEVO LLEKLKKLEEDYYKLRELYRRLEDEKKFIESERIRYEREVRRLRSEVERLRSPPLLVGVVSDILEDGRVVVKSSTGPKFV VNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFA EVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAA RRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKM KLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKVLKKTTPIPDLKGVMFV O28303 ADENOSINE-5'-TRIPHOSPHATE 0.000507181 4 ATP MAGNESIUM ION 2.4305e-05 5 MG ADENOSINE-5'-DIPHOSPHATE 0.000427201 1 ADP singleParticle particle 7.1 ETHANE-PROPANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 GATAN K2 SUMMIT (4k x 4k) SUPER-RESOLUTION 30.0 1 C1 6.86 FSC 0.143 CUT-OFF RELION 2.1 38230 PROJECTION MATCHING PROJECTION MATCHING emd_0212.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 384 384 384 0 0 0 384 384 384 514.56 514.56 514.56 90.0 90.0 90.0 X Y Z -0.03647783 0.043262266 0.000027298773 0.0013231856 1.34 1.34 1.34 0.006 AUTHOR ::::EMDATABANK.org::::EMD-0212:::: Pseudo-single capped PAN-proteasome in state 1 FLEXIBLE FIT REAL emd_0212_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 384 384 384 0 0 0 384 384 384 514.56 514.56 514.56 90.0 90.0 90.0 X Y Z -0.039748225 0.054464325 0.0000073352267 0.0009118389 1.34 1.34 1.34 AUTHOR ::::EMDATABANK.org::::EMD-0212:::: AAAob of PAN-proteasome in state 1