<?xml version="1.0" encoding="UTF-8"?>
<emd emdb_id="EMD-29532">
    <admin>
        <current_status>
            <date>2023-07-05</date>
            <code>OBS</code>
            <processing_site>RCSB</processing_site>
        </current_status>
        <sites>
            <deposition>RCSB</deposition>
            <last_processing>RCSB</last_processing>
        </sites>
        <key_dates>
            <deposition>2023-01-24</deposition>
            <header_release>2023-02-22</header_release>
            <map_release>2023-02-22</map_release>
            <obsolete>2023-07-05</obsolete>
            <update>2023-07-05</update>
        </key_dates>
        <grant_support>
            <grant_reference>
                <funding_body>National Institutes of Health/National Institute of Neurological Disorders and Stroke (NIH/NINDS)</funding_body>
                <country>United States</country>
            </grant_reference>
        </grant_support>
        <title>TRPV2 with CBD and PI lipid</title>
        <authors_list>
            <author>Tan X</author>
            <author>Swartz KJ</author>
        </authors_list>
        <keywords>Transport protein, MEMBRANE PROTEIN</keywords>
    </admin>
    <crossreferences>
        <citation_list>
            <primary_citation>
                <journal_citation published="true">
                    <author order="1">Gochman A</author>
                    <author order="2">Tan X</author>
                    <author order="3">Bae C</author>
                    <author order="4">Chen H</author>
                    <author ORCID="0000-0003-3419-0765" order="5">Swartz KJ</author>
                    <author ORCID="0000-0001-5921-9320" order="6">Jara-Oseguera A</author>
                    <title>Cannabidiol sensitizes TRPV2 channels to activation by 2-APB.</title>
                    <journal_abbreviation>Biorxiv</journal_abbreviation>
                    <country>US</country>
                    <year>2023</year>
                    <external_references type="PUBMED">36747846</external_references>
                    <external_references type="DOI">doi:10.1101/2023.01.27.525817</external_references>
                    <external_references type="ISSN">2692-8205</external_references>
                </journal_citation>
            </primary_citation>
        </citation_list>
        <emdb_list>
            <emdb_reference>
                <emdb_id>EMD-29532</emdb_id>
                <relationship>
                    <other>associated EM volume</other>
                </relationship>
                <details>TRPV2 with CBD and PI lipid</details>
            </emdb_reference>
        </emdb_list>
        <pdb_list>
            <pdb_reference>
                <pdb_id>8fxg</pdb_id>
                <relationship>
                    <in_frame>FULLOVERLAP</in_frame>
                </relationship>
            </pdb_reference>
        </pdb_list>
    </crossreferences>
    <sample>
        <name>Trpv2 with CBD ligand</name>
        <supramolecule_list>
            <cell_supramolecule supramolecule_id="1">
                <name>Trpv2 with CBD ligand</name>
                <parent>0</parent>
                <macromolecule_list>
                    <macromolecule>
                        <macromolecule_id>1</macromolecule_id>
                    </macromolecule>
                </macromolecule_list>
                <natural_source database="NCBI">
                    <organism ncbi="10116">Rattus norvegicus</organism>
                </natural_source>
            </cell_supramolecule>
        </supramolecule_list>
        <macromolecule_list>
            <protein_or_peptide macromolecule_id="1">
                <name>Transient receptor potential cation channel subfamily V member 2</name>
                <natural_source database="NCBI">
                    <organism ncbi="10116">Rattus norvegicus</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.086798891</theoretical>
                </molecular_weight>
                <number_of_copies>4</number_of_copies>
                <recombinant_expression database="NCBI">
                    <recombinant_organism ncbi="9606">Homo sapiens</recombinant_organism>
                </recombinant_expression>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>MTSASSPPAFRLETSDGDEEGNAEVNKGKQEPPPMESPFQREDRNSSPQIKVNLNFIKRPPKNTSAPSQQEPDRFDRDRL
FSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKLLVNAQCTDE
FYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLE
ATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFS
GPYQPLSRKFTEWCYGPVRVSLYDLSSVDSWEKNSVLEIIAFHCKSPNRHRMVVLEPLNKLLQEKWDRLVSRFFFNFACY
LVYMFIFTVVAYHQPSLDQPAIPSSKATFGESMLLLGHILILLGGIYLLLGQLWYFWRRRLFIWISFMDSYFEILFLLQA
LLTVLSQVLRFMETEWYLPLLVLSLVLGWLNLLYYTRGFQHTGIYSVMIQKVILRDLLRFLLVYLVFLFGFAVALVSLSR
EARSPKAPEDNNSTVTEQPTVGQEEEPAPYRSILDASLELFKFTIGMGELAFQEQLRFRGVVLLLLLAYVLLTYVLLLNM
LIALMSETVNHVADNSWSIWKLQKAISVLEMENGYWWCRRKKHREGRLLKVGTRGDGTPDERWCFRVEEVNWAAWEKTLP
TLSEDPSGPGITGNKKNPTSKPGKNSASEEDHLPLQVLQSP</string>
                </sequence>
            </protein_or_peptide>
            <ligand macromolecule_id="2">
                <name>cannabidiol</name>
                <molecular_weight>
                    <theoretical units="MDa">0.000314462</theoretical>
                </molecular_weight>
                <number_of_copies>8</number_of_copies>
                <formula>P0T</formula>
            </ligand>
            <ligand macromolecule_id="3">
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                <molecular_weight>
                    <theoretical units="MDa">0.000600633</theoretical>
                </molecular_weight>
                <number_of_copies>4</number_of_copies>
                <formula>XJ7</formula>
            </ligand>
            <ligand macromolecule_id="4">
                <name>SODIUM ION</name>
                <molecular_weight>
                    <theoretical units="MDa">2.299e-05</theoretical>
                </molecular_weight>
                <number_of_copies>1</number_of_copies>
                <formula>NA</formula>
            </ligand>
            <ligand macromolecule_id="5">
                <name>water</name>
                <molecular_weight>
                    <theoretical units="MDa">1.8015e-05</theoretical>
                </molecular_weight>
                <number_of_copies>4</number_of_copies>
                <formula>HOH</formula>
            </ligand>
        </macromolecule_list>
    </sample>
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            <method>singleParticle</method>
            <aggregation_state>particle</aggregation_state>
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                    <buffer>
                        <ph>7.5</ph>
                    </buffer>
                    <vitrification>
                        <cryogen_name>ETHANE</cryogen_name>
                        <chamber_humidity units="percentage">100</chamber_humidity>
                        <instrument>FEI VITROBOT MARK IV</instrument>
                    </vitrification>
                </single_particle_preparation>
            </specimen_preparation_list>
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                <single_particle_microscopy microscopy_id="1">
                    <microscope>FEI TITAN KRIOS</microscope>
                    <illumination_mode>FLOOD BEAM</illumination_mode>
                    <imaging_mode>BRIGHT FIELD</imaging_mode>
                    <electron_source>TUNGSTEN HAIRPIN</electron_source>
                    <acceleration_voltage units="kV">300</acceleration_voltage>
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                    <nominal_defocus_max units="µm">1.6</nominal_defocus_max>
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                        <image_recording image_recording_id="1">
                            <film_or_detector_model>GATAN K3 BIOQUANTUM (6k x 4k)</film_or_detector_model>
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                        </image_recording>
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                <startup_model type_of_model="PDB ENTRY">
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                        <pdb_id>6U84</pdb_id>
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                    <type>MAXIMUM LIKELIHOOD</type>
                </final_angle_assignment>
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        </structure_determination>
    </structure_determination_list>
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        <label>::::EMDATABANK.org::::EMD-29532::::</label>
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    <interpretation>
        <modelling_list>
            <modelling>
                <refinement_protocol>RIGID BODY FIT</refinement_protocol>
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