2021-08-04 OBS 2020-09-03 PDBe PDBe 2021-07-28 2021-07-28 2021-08-04 Erythromycin-stalled E.coli ribosome with Streptococcal MsrDL nascent chain Soufari H, Fostier RC, Boel G, Hashem Y 7aa6 Fostier RC, Soufari H, Boel G, Hashem Y Erythromycin-stalled E.coli ribosome with streptoccocal MsrDL nascent chain To Be Published 0353 emd_11691.map.gz Image stored as Reals 320 320 320 0.0 0.0 0.0 319.0 319.0 319.0 320 320 320 355.2 355.2 355.2 90.0 90.0 90.0 X Y Z -0.11727475 0.22583526 -0.000549352 0.011975045 1
1.11 1.11 1.11 0.03 63 Erythromycin-stalled E.coli ribosome with streptoccocal MsrDL nascent chain protein Erythromycin-stalled E.coli ribosome with streptoccocal MsrDL nascent chain false protein Erythromycin-stalled E.coli ribosome Escherichia coli false protein MsrDL and mRNA Streptococcus pneumoniae false Escherichia coli nucleic-acid 23S 0.93960725 Escherichia coli false GGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUCG GUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUGA AUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCCC AGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCGA UACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCUG AAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAAA GAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUGC GUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGUC UUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACACU AACUGGAGGACCGAACCGACUAAU(1MG)(PSU)(5MU)GAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCA AUCAAACCGGGAGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACU GUUUCGGCAAGGGGGUCACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGG (PSU)GCUAACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAAC GAUGUGGGAAGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCG AGUCGGCCUGCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAG GGGAGCGUUCUGUAAGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAAC GAUAAAGCGGGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCC CUAAGGCGAGGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGG AGAAGGCUAUGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAG GCUGAGGCGUGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUA ACAUCAAAUCGUACCCCAAACCGACAC(6MZ)GGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAG GAACUAGGCAAAAUGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAGGUCCCUCGCGGAUGGAGCUGAAA UCAGUCGAAGAUACCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUG UGACGCCU(2MG)CCCGGUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAAC GGCGGCCG(PSU)AAC(3TD)A(PSU)AACGGUCCUAAGGUAGCGAAA(5MU)UCCUUGUCGGGUAAGUUCCGAC(5MC) UGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCACCCGAGACUCAGUGAAAUUGAACUCGCUGUG(6MZ)AGAUGCAG UGUACCCGCGGCAAGACGGAAAGACCCCGU(G7M)AACCUUUACUAUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUA GGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGU UCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGGGUAGUUUGACUG(OMG)GGCGGUCUCCUCCUAAAGA GUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGGUUAGUGCAAUGGCAUAAGCCAGCUUGACUGC GAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUGGUUCUGAAUGGAAGGGCCAUCGCUCAACGGA UAAAAGGUACUCCG(2MG)GGAUAACAGGC(PSU)GAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCA(OMC) CUCG(2MA)(PSU)GUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGC(OMU)GUUCGCCAUUUAAA GUGGUACGCGAGC(PSU)GGGUUUAGAACGUCGUGAGACAG(PSU)(PSU)CGGUCCCUAUCUGCCGUGGGCGCUGGAGA ACUGAGGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUG CCCGGUAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACC CUUUAAGGGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAAC CGGUACUAAUGAACCGUGAGGCUUAACCU RNA OTHER nucleic-acid 5S 0.03879008999999999 Escherichia coli false UGCCUGGCGGCCGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGU GUGGGGUCUCCCCAUGCGAGAGUAGGGAACUGCCAGGCAU RNA OTHER protein 50S ribosomal protein L2 0.029923619 Escherichia coli 1 false protein 50S ribosomal protein L3 0.022291562 Escherichia coli 1 false protein 50S ribosomal protein L4 0.022121566 Escherichia coli 1 false protein 50S ribosomal protein L5 0.020333611 Escherichia coli 1 false protein 50S ribosomal protein L6 0.018932791 Escherichia coli 1 false protein 50S ribosomal protein L9 0.01578902 Escherichia coli 1 false protein 50S ribosomal protein L13 0.016050606 Escherichia coli 1 false protein 50S ribosomal protein L14 0.013565066999999998 Escherichia coli 1 false protein 50S ribosomal protein L15 0.015008470999999999 Escherichia coli 1 false protein 50S ribosomal protein L16 0.015327261 Escherichia coli 1 false protein 50S ribosomal protein L17 0.014393656999999999 Escherichia coli 1 false protein 50S ribosomal protein L18 0.012794667999999999 Escherichia coli 1 false protein 50S ribosomal protein L19 0.013159278 Escherichia coli 1 false protein 50S ribosomal protein L20 0.013528024 Escherichia coli 1 false protein 50S ribosomal protein L21 0.011586374 Escherichia coli 1 false protein 50S ribosomal protein L22 0.012253359 Escherichia coli 1 false protein 50S ribosomal protein L23 0.01122216 Escherichia coli 1 false protein 50S ribosomal protein L24 0.011339249999999999 Escherichia coli 1 false protein 50S ribosomal protein L25 0.010713465 Escherichia coli 1 false protein 50S ribosomal protein L27 0.00914654 Escherichia coli 1 false protein 50S ribosomal protein L28 0.009027550999999998 Escherichia coli 1 false protein 50S ribosomal protein L29 0.0072864639999999994 Escherichia coli 1 false protein 50S ribosomal protein L30 0.006554819999999999 Escherichia coli 1 false protein 50S ribosomal protein L31 0.007887116999999999 Escherichia coli 1 false protein 50S ribosomal protein L32 0.006463444999999999 Escherichia coli 1 false protein 50S ribosomal protein L33 0.006388631 Escherichia coli 1 false protein 50S ribosomal protein L34 0.005397463 Escherichia coli 1 false protein 50S ribosomal protein L35 0.007313032 Escherichia coli 1 false protein 50S ribosomal protein L36 0.00437739 Escherichia coli 1 false nucleic-acid 16S 0.497404969 Escherichia coli false AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGA AGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGA AACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUG GGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGA ACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGC CGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUU GACGUUACCCGCAGAAGAAGCACCGGCUAACUCCG(PSU)GCCAGCAGCC(G7M)CGGUAAUACGGAGGGUGCAAGCGUU AAUCGGAAUUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACU GCAUCUGAUACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGA GGAAUACCGGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGA UACCCUGGUAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUA AGUCGACCGCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGU GGUUUAAUUCGAU(2MG)(5MC)AACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUG UGCCUUCGGGAACCGUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACG AGCGCAACCCUUAUCCUUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUG GGGAUGACGUCAAGUCAUCAUG(2MG)CCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCG ACCUCGCGAGAGCAAGCGGACCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAA UCGCUAGUAAUCGUGGAUCAGAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCG(4OC)CCGU(5MC)ACACC AUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGA AGUCG(UR3)AACAAGGUAACCGUAGG(2MG)G(MA6)(MA6)CCUGCGGUUGGAUCA RNA OTHER protein 30S ribosomal protein S2 0.026781669999999997 Escherichia coli 1 false protein 30S ribosomal protein S3 0.026031316 Escherichia coli 1 false protein 30S ribosomal protein S4 0.023514199 Escherichia coli 1 false protein 30S ribosomal protein S5 0.017629398 Escherichia coli 1 false protein 30S ribosomal protein S6 0.015727512 Escherichia coli 1 false protein 30S ribosomal protein S7 0.020055155999999998 Escherichia coli 1 false protein 30S ribosomal protein S8 0.014146557 Escherichia coli 1 false protein 30S ribosomal protein S9 0.01488627 Escherichia coli 1 false protein 30S ribosomal protein S10 0.011755597 Escherichia coli 1 false protein 30S ribosomal protein S11 0.013870974999999999 Escherichia coli 1 false protein 30S ribosomal protein S12 0.013814248999999999 Escherichia coli 1 false protein 30S ribosomal protein S13 0.013128467 Escherichia coli 1 false protein 30S ribosomal protein S14 0.011606559999999998 Escherichia coli 1 false protein 30S ribosomal protein S15 0.010290816 Escherichia coli 1 false protein 30S ribosomal protein S16 0.009207571999999999 Escherichia coli 1 false protein 30S ribosomal protein S17 0.009724491 Escherichia coli 1 false protein 30S ribosomal protein S18 0.009005471999999999 Escherichia coli 1 false protein 30S ribosomal protein S19 0.010455355 Escherichia coli 1 false protein 30S ribosomal protein S20 0.009708464 Escherichia coli 1 false protein 30S ribosomal protein S21 0.008524039 Escherichia coli 1 false protein MsrDL 0.00084508 Streptococcus pneumoniae 1 false Escherichia coli nucleic-acid PtRNA 0.02475691 Escherichia coli false GGCUACG(4SU)AGCUCAGUU(OMG)GUAGAGCACAUCACU(4AC)AU(T6A)A(PSU)GAUGGG(7MG)(3AU)CACAG GU(PSU)CGAAUCCCGUCGUAGCCACCA RNA OTHER nucleic-acid mRNA 0.0028177109999999997 Streptococcus pneumoniae false UUCAUGUAA RNA OTHER ligand ERYTHROMYCIN A 0.000733927 1 false ligand MAGNESIUM ION 2.4305e-05 266 false ligand POTASSIUM ION 3.9098e-05 23 false ligand UNKNOWN ATOM OR ION 132 false ligand ZINC ION 6.5409e-05 2 false ETHANE 100 FEI VITROBOT MARK IV FIELD EMISSION GUN 60.0 BRIGHT FIELD FLOOD BEAM GATAN K2 SUMMIT (4k x 4k) FEI TALOS ARCTICA OTHER 200 particle 7.0 singleParticle 2.9 FSC 0.143 CUT-OFF C1 75224